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- H19: H19, imprinted maternally expressed transcript (non-protein coding)
- HADH: hydroxyacyl-CoA dehydrogenase
- HADHA: hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
- HADHB: hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
- HAL: histidine ammonia-lyase
- HAMP: hepcidin antimicrobial peptide
- HAX1: HCLS1 associated protein X-1
- HBA1: hemoglobin, alpha 1
- HBA2: hemoglobin, alpha 2
- HBB: hemoglobin, beta
- HCCS: holocytochrome c synthase
- HES7: hairy and enhancer of split 7 (Drosophila)
- HESX1: HESX homeobox 1
- HEXA: hexosaminidase A (alpha polypeptide)
- HEXB: hexosaminidase B (beta polypeptide)
- HFE: hemochromatosis
- HFE2: hemochromatosis type 2 (juvenile)
- HGD: homogentisate 1,2-dioxygenase
- HGSNAT: heparan-alpha-glucosaminide N-acetyltransferase
- HLA-B: major histocompatibility complex, class I, B
- HLA-DQA1: major histocompatibility complex, class II, DQ alpha 1
- HLA-DQB1: major histocompatibility complex, class II, DQ beta 1
- HLA-DRB1: major histocompatibility complex, class II, DR beta 1
- HLCS: holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
- HMBS: hydroxymethylbilane synthase
- HMGCL: 3-hydroxymethyl-3-methylglutaryl-CoA lyase
- HOXA13: homeobox A13
- HPD: 4-hydroxyphenylpyruvate dioxygenase
- HPRT1: hypoxanthine phosphoribosyltransferase 1
- HPS1: Hermansky-Pudlak syndrome 1
- HPS3: Hermansky-Pudlak syndrome 3
- HPSE2: heparanase 2
- HRAS: v-Ha-ras Harvey rat sarcoma viral oncogene homolog
- HS1BP3: HCLS1 binding protein 3
- HSD3B2: hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
- HSD17B3: hydroxysteroid (17-beta) dehydrogenase 3
- HSD17B10: hydroxysteroid (17-beta) dehydrogenase 10
- HSPB1: heat shock 27kDa protein 1
- HSPB8: heat shock 22kDa protein 8
- HTRA1: HtrA serine peptidase 1
- HTT: huntingtin
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