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Genetics Home Reference: your guide to understanding genetic conditions
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LGIC gene family

Reviewed June 2012

What are the LGIC genes?

Genes in the LGIC gene family provide instructions for making ligand-gated ion channels. These channels span the membrane that surrounds cells and form a hole (pore) through which positively or negatively charged atoms (ions), such as sodium, potassium, calcium, or chloride ions, can flow. The flow of ions is triggered by the attachment (binding) of proteins called ligands. Each channel is "opened" by the binding of a particular ligand. The ligands that open ligand-gated ion channels are called neurotransmitters because they transmit signals in the brain.

Genes in the LGIC family can be divided into several groups based on the ligand that binds to the channel. Nicotinic acetylcholine receptors are triggered by the binding of a chemical called acetylcholine. Serotonin type 3 (5-HT3) receptors are triggered by serotonin. GABAA receptors are triggered by gamma-aminobutyric acid (GABA). Ionotropic glutamate receptors are triggered by glutamate. Glycine receptors are triggered by glycine. Ionotropic purinergic receptors are triggered by a chemical called adenosine triphosphate (ATP). And zinc-activated channels are triggered by zinc.

Ligand-gated ion channels play an important role in the nervous system. The channels are primarily found in nerve cells (neurons) in the brain, spinal cord, and muscles, and they function to control the transmission of nerve impulses from neuron to neuron or neuron to muscle. The flow of positively charged ions into the cell turns on (excites) nerve impulses. In contrast, the flow of negatively charged ions into the cell blocks (inhibits) nerve impulses to prevent the nervous system from being overloaded with too many signals. Nicotinic acetylcholine receptors, 5-HT3 receptors, and ionotropic glutamate receptors allow the flow of positively charged sodium, potassium, and, sometimes, calcium ions, which excites nerve signaling. Similarly, ionotropic purinergic receptors allow calcium ions to cross the cell membrane, exciting nerve signaling. GABAA and glycine receptors allow the flow of negatively charged chloride ions, and so these channels inhibit nerve signaling. The function of zinc channels is unknown.

Signaling in the brain through ligand-gated ion channels is important for many neurological functions, including learning, memory formation, movement of muscles, and reflexes. Mutations in genes in the LGIC family can lead to neurological disorders such as seizures, movement difficulties, and abnormal muscle stiffness and weakness.

Which genes are included in the LGIC gene family?

The HUGO Gene Nomenclature Committee (HGNC) provides a list of genes in the LGIC family (http://www.genenames.org/genefamilies/LGIC).

Genetics Home Reference summarizes the normal function and health implications of this member of the LGIC gene family: GABRA1.

What conditions are related to genes in the LGIC gene family?

Genetics Home Reference includes these conditions related to genes in the LGIC gene family:

  • juvenile myoclonic epilepsy

Where can I find additional information about the LGIC gene family?

You may find the following resources about the LGIC gene family helpful.

  • Basic Neurochemistry: Molecular, Cellular and Medical Aspects (sixth edition, 1999): Serotonin Receptors (http://www.ncbi.nlm.nih.gov/books/NBK28234/)
  • Neuroscience (second edition, 2001): Purinergic Receptors (http://www.ncbi.nlm.nih.gov/books/NBK10846/)
  • Neuroscience (second edition, 2001): Figure 7.11: The General Architecture of Ligand-Gated Receptors (http://www.ncbi.nlm.nih.gov/books/NBK10834/figure/A492/?report=objectonly)

What glossary definitions help with understanding the LGIC gene family?

acetylcholine ; adenosine triphosphate ; ATP ; calcium ; cell ; cell membrane ; channel ; chloride ; GABA ; gamma-aminobutyric acid ; gene ; glycine ; HT ; ions ; ligand ; nervous system ; neurological ; neuron ; neurotransmitters ; potassium ; receptor ; sodium

You may find definitions for these and many other terms in the Genetics Home Reference Glossary (http://www.ghr.nlm.nih.gov/glossary).

References

These sources were used to develop the Genetics Home Reference summary for the LGIC gene family.

  • University of Bristol MRC Centre for Synaptic Plasticity: Glutamate Receptors (http://www.bristol.ac.uk/synaptic/receptors/)
  • Vafa B, Schofield PR. Heritable mutations in the glycine, GABAA, and nicotinic acetylcholine receptors provide new insights into the ligand-gated ion channel receptor superfamily. Int Rev Neurobiol. 1998;42:285-332. Review. (http://www.ncbi.nlm.nih.gov/pubmed/9476176?dopt=Abstract)
  • Rajendra S, Lynch JW, Schofield PR. The glycine receptor. Pharmacol Ther. 1997;73(2):121-46. Review. (http://www.ncbi.nlm.nih.gov/pubmed/9131721?dopt=Abstract)
  • Abbracchio MP, Burnstock G, Verkhratsky A, Zimmermann H. Purinergic signalling in the nervous system: an overview. Trends Neurosci. 2009 Jan;32(1):19-29. doi: 10.1016/j.tins.2008.10.001. Epub 2008 Nov 12. Review. (http://www.ncbi.nlm.nih.gov/pubmed/19008000?dopt=Abstract)
  • Debanne D, Daoudal G, Sourdet V, Russier M. Brain plasticity and ion channels. J Physiol Paris. 2003 Jul-Nov;97(4-6):403-14. Review. (http://www.ncbi.nlm.nih.gov/pubmed/15242652?dopt=Abstract)

 

The resources on this site should not be used as a substitute for professional medical care or advice. Users seeking information about a personal genetic disease, syndrome, or condition should consult with a qualified healthcare professional. See How can I find a genetics professional in my area? (http://ghr.nlm.nih.gov/handbook/consult/findingprofessional) in the Handbook.

 
Reviewed: June 2012
Published: May 20, 2013